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[Refactor] Large scale formatting/linting (#193)

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All html files now prettier formatted and fixes for incompatible blocks applied

Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#193
Co-authored-by: Tobias O <tobias.olenyi@envipath.com>
Co-committed-by: Tobias O <tobias.olenyi@envipath.com>
This commit is contained in:
Tobias O
2025-11-12 22:47:10 +13:00
committed by jebus
parent 12a20756d6
commit 21d30a923f
114 changed files with 10684 additions and 7009 deletions
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143
templates/actions/objects/pathway.html
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@ -1,59 +1,92 @@
{% if meta.can_edit %}
<li>
<a class="button" data-toggle="modal" data-target="#add_pathway_node_modal">
<i class="glyphicon glyphicon-plus"></i> Add Compound</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#add_pathway_edge_modal">
<i class="glyphicon glyphicon-plus"></i> Add Reaction</a>
</li>
<li role="separator" class="divider"></li>
<li>
<a class="button" data-toggle="modal" data-target="#add_pathway_node_modal">
<i class="glyphicon glyphicon-plus"></i> Add Compound</a
>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#add_pathway_edge_modal">
<i class="glyphicon glyphicon-plus"></i> Add Reaction</a
>
</li>
<li role="separator" class="divider"></li>
{% endif %}
<li>
<a role="button" data-toggle="modal" data-target="#generic_copy_object_modal">
<i class="glyphicon glyphicon-duplicate"></i> Copy</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#download_pathway_csv_modal">
<i class="glyphicon glyphicon-floppy-save"></i> Download Pathway as CSV</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#download_pathway_image_modal">
<i class="glyphicon glyphicon-floppy-save"></i> Download Pathway as Image</a>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#generic_copy_object_modal">
<i class="glyphicon glyphicon-duplicate"></i> Copy</a
>
</li>
<li>
<a
class="button"
data-toggle="modal"
data-target="#download_pathway_csv_modal"
>
<i class="glyphicon glyphicon-floppy-save"></i> Download Pathway as CSV</a
>
</li>
<li>
<a
class="button"
data-toggle="modal"
data-target="#download_pathway_image_modal"
>
<i class="glyphicon glyphicon-floppy-save"></i> Download Pathway as Image</a
>
</li>
{% if meta.can_edit %}
<li>
<a class="button" data-toggle="modal" data-target="#identify_missing_rules_modal">
<i class="glyphicon glyphicon-question-sign"></i> Identify Missing Rules</a>
</li>
<li role="separator" class="divider"></li>
<li>
<a class="button" data-toggle="modal" data-target="#edit_pathway_modal">
<i class="glyphicon glyphicon-edit"></i> Edit Pathway</a>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#set_scenario_modal">
<i class="glyphicon glyphicon-plus"></i> Set Scenarios</a>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#set_aliases_modal">
<i class="glyphicon glyphicon-plus"></i> Set Aliases</a>
</li>
{# <li>#}
{# <a class="button" data-toggle="modal" data-target="#add_pathway_edge_modal">#}
{# <i class="glyphicon glyphicon-plus"></i> Calculate Compound Properties</a>#}
{# </li>#}
<li role="separator" class="divider"></li>
<li>
<a class="button" data-toggle="modal" data-target="#delete_pathway_node_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Compound</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#delete_pathway_edge_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Reaction</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#generic_delete_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Pathway</a>
</li>
<li>
<a
class="button"
data-toggle="modal"
data-target="#identify_missing_rules_modal"
>
<i class="glyphicon glyphicon-question-sign"></i> Identify Missing
Rules</a
>
</li>
<li role="separator" class="divider"></li>
<li>
<a class="button" data-toggle="modal" data-target="#edit_pathway_modal">
<i class="glyphicon glyphicon-edit"></i> Edit Pathway</a
>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#set_scenario_modal">
<i class="glyphicon glyphicon-plus"></i> Set Scenarios</a
>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#set_aliases_modal">
<i class="glyphicon glyphicon-plus"></i> Set Aliases</a
>
</li>
{# <li>#}
{# <a class="button" data-toggle="modal" data-target="#add_pathway_edge_modal">#}
{# <i class="glyphicon glyphicon-plus"></i> Calculate Compound Properties</a>#}
{# </li>#}
<li role="separator" class="divider"></li>
<li>
<a
class="button"
data-toggle="modal"
data-target="#delete_pathway_node_modal"
>
<i class="glyphicon glyphicon-trash"></i> Delete Compound</a
>
</li>
<li>
<a
class="button"
data-toggle="modal"
data-target="#delete_pathway_edge_modal"
>
<i class="glyphicon glyphicon-trash"></i> Delete Reaction</a
>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#generic_delete_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Pathway</a
>
</li>
{% endif %}