[Refactor] Large scale formatting/linting (#193)

All html files now prettier formatted and fixes for incompatible blocks applied

Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#193
Co-authored-by: Tobias O <tobias.olenyi@envipath.com>
Co-committed-by: Tobias O <tobias.olenyi@envipath.com>
This commit is contained in:
2025-11-12 22:47:10 +13:00
committed by jebus
parent 12a20756d6
commit 21d30a923f
114 changed files with 10684 additions and 7009 deletions

View File

@ -1,105 +1,164 @@
{% extends "framework.html" %}
{% block content %}
<div class="panel-group" id="enzyme-detail">
<div class="panel panel-default">
<div
class="panel-heading"
id="headingPanel"
style="font-size:2rem;height: 46px"
>
{{ enzymelink.ec_number }}
</div>
<div class="panel-group" id="enzyme-detail">
<div class="panel panel-default">
<div class="panel-heading" id="headingPanel" style="font-size:2rem;height: 46px">
{{ enzymelink.ec_number }}
</div>
<!-- Name -->
<div class="panel panel-default panel-heading list-group-item" style="background-color:silver">
<h4 class="panel-title">
<a id="enzyme-name-link" data-toggle="collapse" data-parent="#enzyme-detail"
href="#enzyme-name">Enzyme Name</a>
</h4>
</div>
<div id="enzyme-name" class="panel-collapse collapse in">
<div class="panel-body list-group-item">
{{ enzymelink.name }}
</div>
</div>
<!-- Linking Method -->
<div class="panel panel-default panel-heading list-group-item" style="background-color:silver">
<h4 class="panel-title">
<a id="enzyme-linking-link" data-toggle="collapse" data-parent="#enzyme-detail"
href="#enzyme-linking">Linking Method</a>
</h4>
</div>
<div id="enzyme-linking" class="panel-collapse collapse in">
<div class="panel-body list-group-item">
{{ enzymelink.linking_method }}. &nbsp;<a
href="https://wiki.envipath.org/index.php/Rules#EnzymeLinks" target="#">Learn more &gt;&gt;</a>
</div>
</div>
{% if enzymelink.kegg_reaction_links %}
<div class="panel panel-default panel-heading list-group-item" style="background-color:silver">
<h4 class="panel-title">
<a id="enzyme-evidence-link" data-toggle="collapse" data-parent="#enzyme-detail"
href="#enzyme-evidence">Linking Evidence</a>
</h4>
</div>
<div id="enzyme-evidence" class="panel-collapse collapse in">
<div class="panel-body list-group-item">
{% for kl in enzymelink.kegg_reaction_links %}
<a class="list-group-item"
href="{{ kl.external_url }}">{{ kl.identifier_value }}</a>
{% endfor %}
</div>
</div>
{% endif %}
{% if enzymelink.reaction_evidence.all %}
<div class="panel panel-default panel-heading list-group-item" style="background-color:silver">
<h4 class="panel-title">
<a id="enzyme-reaction-evidence-link" data-toggle="collapse" data-parent="#enzyme-detail"
href="#enzyme-reaction-evidence">Linking Evidence - enviPath Reactions</a>
</h4>
</div>
<div id="enzyme-reaction-evidence" class="panel-collapse collapse in">
<div class="panel-body list-group-item">
{% for r in enzymelink.reaction_evidence.all %}
<a class="list-group-item" href="{{ r.url }}">{{ r.name }} <i>({{ r.package.name }})</i></a>
{% endfor %}
</div>
</div>
{% endif %}
{% if enzymelink.edge_evidence.all %}
<div class="panel panel-default panel-heading list-group-item" style="background-color:silver">
<h4 class="panel-title">
<a id="enzyme-edge-evidence-link" data-toggle="collapse" data-parent="#enzyme-detail"
href="#enzyme-edge-evidence">Linking Evidence - enviPath Pathways</a>
</h4>
</div>
<div id="enzyme-edge-evidence" class="panel-collapse collapse in">
<div class="panel-body list-group-item">
{% for e in enzymelink.edge_evidence.all %}
<a class="list-group-item" href="{{ e.pathway.url }}">{{ e.pathway.name }}
<i>({{ r.package.name }})</i></a>
{% endfor %}
</div>
</div>
{% endif %}
<!-- External DB Reference -->
<div class="panel panel-default panel-heading list-group-item" style="background-color:silver">
<h4 class="panel-title">
<a id="enzyme-external-identifier-link" data-toggle="collapse" data-parent="#enzyme-detail"
href="#enzyme-external-identifier">External DB References</a>
</h4>
</div>
<div id="enzyme-external-identifier" class="panel-collapse collapse in">
<div class="panel-body list-group-item">
<a class="list-group-item"
href="http://www.brenda-enzymes.org/enzyme.php?ecno={{ enzymelink.ec_number }}"
target="_blank"> Brenda entry for {{ enzymelink.ec_number }}</a>
</div>
</div>
<!-- Name -->
<div
class="panel panel-default panel-heading list-group-item"
style="background-color:silver"
>
<h4 class="panel-title">
<a
id="enzyme-name-link"
data-toggle="collapse"
data-parent="#enzyme-detail"
href="#enzyme-name"
>Enzyme Name</a
>
</h4>
</div>
<div id="enzyme-name" class="panel-collapse in collapse">
<div class="panel-body list-group-item">{{ enzymelink.name }}</div>
</div>
<!-- Linking Method -->
<div
class="panel panel-default panel-heading list-group-item"
style="background-color:silver"
>
<h4 class="panel-title">
<a
id="enzyme-linking-link"
data-toggle="collapse"
data-parent="#enzyme-detail"
href="#enzyme-linking"
>Linking Method</a
>
</h4>
</div>
<div id="enzyme-linking" class="panel-collapse in collapse">
<div class="panel-body list-group-item">
{{ enzymelink.linking_method }}. &nbsp;<a
href="https://wiki.envipath.org/index.php/Rules#EnzymeLinks"
target="#"
>Learn more &gt;&gt;</a
>
</div>
</div>
{% if enzymelink.kegg_reaction_links %}
<div
class="panel panel-default panel-heading list-group-item"
style="background-color:silver"
>
<h4 class="panel-title">
<a
id="enzyme-evidence-link"
data-toggle="collapse"
data-parent="#enzyme-detail"
href="#enzyme-evidence"
>Linking Evidence</a
>
</h4>
</div>
<div id="enzyme-evidence" class="panel-collapse in collapse">
<div class="panel-body list-group-item">
{% for kl in enzymelink.kegg_reaction_links %}
<a class="list-group-item" href="{{ kl.external_url }}"
>{{ kl.identifier_value }}</a
>
{% endfor %}
</div>
</div>
{% endif %}
{% if enzymelink.reaction_evidence.all %}
<div
class="panel panel-default panel-heading list-group-item"
style="background-color:silver"
>
<h4 class="panel-title">
<a
id="enzyme-reaction-evidence-link"
data-toggle="collapse"
data-parent="#enzyme-detail"
href="#enzyme-reaction-evidence"
>Linking Evidence - enviPath Reactions</a
>
</h4>
</div>
<div id="enzyme-reaction-evidence" class="panel-collapse in collapse">
<div class="panel-body list-group-item">
{% for r in enzymelink.reaction_evidence.all %}
<a class="list-group-item" href="{{ r.url }}"
>{{ r.name }} <i>({{ r.package.name }})</i></a
>
{% endfor %}
</div>
</div>
{% endif %}
{% if enzymelink.edge_evidence.all %}
<div
class="panel panel-default panel-heading list-group-item"
style="background-color:silver"
>
<h4 class="panel-title">
<a
id="enzyme-edge-evidence-link"
data-toggle="collapse"
data-parent="#enzyme-detail"
href="#enzyme-edge-evidence"
>Linking Evidence - enviPath Pathways</a
>
</h4>
</div>
<div id="enzyme-edge-evidence" class="panel-collapse in collapse">
<div class="panel-body list-group-item">
{% for e in enzymelink.edge_evidence.all %}
<a class="list-group-item" href="{{ e.pathway.url }}"
>{{ e.pathway.name }} <i>({{ r.package.name }})</i></a
>
{% endfor %}
</div>
</div>
{% endif %}
<!-- External DB Reference -->
<div
class="panel panel-default panel-heading list-group-item"
style="background-color:silver"
>
<h4 class="panel-title">
<a
id="enzyme-external-identifier-link"
data-toggle="collapse"
data-parent="#enzyme-detail"
href="#enzyme-external-identifier"
>External DB References</a
>
</h4>
</div>
<div id="enzyme-external-identifier" class="panel-collapse in collapse">
<div class="panel-body list-group-item">
<a
class="list-group-item"
href="http://www.brenda-enzymes.org/enzyme.php?ecno={{ enzymelink.ec_number }}"
target="_blank"
>
Brenda entry for {{ enzymelink.ec_number }}</a
>
</div>
</div>
</div>
</div>
{% endblock content %}