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Add Edge Template (#33)

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Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#33
This commit is contained in:
jebus
2025-07-23 07:50:39 +12:00
parent 43c95e3da7
commit 2c4c9d95d9
2 changed files with 126 additions and 1 deletions
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19
epdb/views.py
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@ -159,7 +159,8 @@ def _anonymous_or_real(request):
return get_user_model().objects.get(username='anonymous')
def breadcrumbs(first_level_object=None, second_level_namespace=None, second_level_object=None) -> List[Dict[str, str]]:
def breadcrumbs(first_level_object=None, second_level_namespace=None, second_level_object=None,
third_level_namespace=None, third_level_object=None) -> List[Dict[str, str]]:
bread = [
{'Home': s.SERVER_URL},
{'Package': s.SERVER_URL + '/package'},
@ -173,6 +174,12 @@ def breadcrumbs(first_level_object=None, second_level_namespace=None, second_lev
if second_level_object is not None:
bread.append({second_level_object.name: second_level_object.url})
if third_level_namespace is not None:
bread.append({f'{third_level_namespace}'.capitalize(): second_level_object.url + f'/{third_level_namespace}'})
if third_level_object is not None:
bread.append({third_level_object.name: third_level_object.url})
return bread
@ -1432,6 +1439,16 @@ def package_pathway_edge(request, package_uuid, pathway_uuid, edge_uuid):
svg_data = current_edge.as_svg
return HttpResponse(svg_data, content_type="image/svg+xml")
context = get_base_context(request)
context['title'] = f'enviPath - {current_package.name} - {current_pathway.name} - {current_edge.edge_label.name}'
context['meta']['current_package'] = current_package
context['object_type'] = 'reaction'
context['breadcrumbs'] = breadcrumbs(current_package, 'pathway', current_pathway, 'edge', current_edge)
context['edge'] = current_edge
return render(request, 'objects/edge.html', context)
elif request.method == 'POST':
if s.DEBUG:
for k, v in request.POST.items():

108
templates/objects/edge.html
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@ -0,0 +1,108 @@
{% extends "framework.html" %}
{% block content %}
{% block action_modals %}
{# {% include "modals/objects/edit_edge_modal.html" %}#}
{# {% include "modals/objects/delete_edge_modal.html" %}#}
{% endblock action_modals %}
<div class="panel-group" id="edge-detail">
<div class="panel panel-default">
<div class="panel-heading" id="headingPanel" style="font-size:2rem;height: 46px">
{{ edge.edge_label.name }}
<div id="actionsButton"
style="float: right;font-weight: normal;font-size: medium;position: relative; top: 50%; transform: translateY(-50%);z-index:100;display: none;"
class="dropdown"><a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button"
aria-haspopup="true" aria-expanded="false"><span
class="glyphicon glyphicon-wrench"></span> Actions <span class="caret"></span><span
style="padding-right:1em"></span></a>
<ul id="actionsList" class="dropdown-menu">
{% block actions %}
{# {% include "actions/objects/edge.html" %}#}
{% endblock %}
</ul>
</div>
</div>
<!-- Description -->
<div class="panel panel-default panel-heading list-group-item" style="background-color:silver">
<h4 class="panel-title">
<a id="edge-desc-link" data-toggle="collapse" data-parent="#edge-detail"
href="#edge-desc">Description</a>
</h4>
</div>
<div id="edge-desc" class="panel-collapse collapse in">
<div class="panel-body list-group-item">
{{ edge.description }}
</div>
</div>
<!-- Image -->
<div class="panel panel-default panel-heading list-group-item" style="background-color:silver">
<h4 class="panel-title">
<a id="edge-image-link" data-toggle="collapse" data-parent="#edge-detail"
href="#edge-image">Image Representation</a>
</h4>
</div>
<div id="edge-image" class="panel-collapse collapse in">
<div class="panel-body list-group-item">
<div id="image-div" align="center">
{{ edge.edge_label.as_svg|safe }}
</div>
</div>
</div>
<!-- Reaction Description -->
<div class="panel panel-default panel-heading list-group-item" style="background-color:silver">
<h4 class="panel-title">
<a id="edge-description-link" data-toggle="collapse" data-parent="#edge-description-detail"
href="#edge-description-smiles">Reaction Description</a>
</h4>
</div>
<div id="edge-description-smiles" class="panel-collapse collapse in">
<div class="panel-body list-group-item">
{% for educt in edge.start_nodes.all %}
<a class="btn btn-default" href="{{ educt.url }}">{{ educt.name }}</a>
{% endfor %}
<span class="glyphicon glyphicon-arrow-right" style="margin-left:5em;margin-right:5em;"
aria-hidden="true"></span>
{% for product in edge.end_nodes.all %}
<a class="btn btn-default" href="{{ product.url }}">{{ product.name }}</a>
{% endfor %}
</div>
</div>
<!-- SMIRKS -->
<div class="panel panel-default panel-heading list-group-item" style="background-color:silver">
<h4 class="panel-title">
<a id="edge-smirks-link" data-toggle="collapse" data-parent="#edge-detail"
href="#edge-smirks">SMIRKS Representation</a>
</h4>
</div>
<div id="edge-smirks" class="panel-collapse collapse in">
<div class="panel-body list-group-item">
{{ edge.edge_label.smirks }}
</div>
</div>
{% if edge.edge_label.rules.all %}
<!-- Rules -->
<div class="panel panel-default panel-heading list-group-item" style="background-color:silver">
<h4 class="panel-title">
<a id="edge-rules-link" data-toggle="collapse" data-parent="#edge-detail"
href="#edge-rules">Rules</a>
</h4>
</div>
<div id="edge-rules" class="panel-collapse collapse in">
<div class="panel-body list-group-item">
{% for r in edge.edge_label.rules.all %}
<a class="list-group-item" href="{{ r.url }}">{{ r.name }}</a>
{% endfor %}
</div>
</div>
{% endif %}
</div>
{% endblock content %}