[Feature] Server pagination implementation (#243)

## Major Changes
- Implement a REST style API app in epapi
- Currently implements a GET method for all entity types in the browse menu (both package level and global)
- Provides paginated results per default with query style filtering for reviewed vs unreviewed.
- Provides new paginated templates with thin wrappers per entity types for easier maintainability
- Implements e2e tests for the API

## Minor changes
- Added more comprehensive gitignore to cover coverage reports and other test/node.js etc. data.
- Add additional CI file for API tests that only gets triggered on API relevant changes.

## ⚠️ Currently only works with session-based authentication. Token based will be added in new PR.

Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Co-authored-by: jebus <lorsbach@envipath.com>
Reviewed-on: enviPath/enviPy#243
Co-authored-by: Tobias O <tobias.olenyi@envipath.com>
Co-committed-by: Tobias O <tobias.olenyi@envipath.com>
This commit is contained in:
2025-12-15 11:34:53 +13:00
committed by jebus
parent d2d475b990
commit 8adb93012a
59 changed files with 3101 additions and 620 deletions

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{% extends "collections/paginated_base.html" %}
{% block page_title %}Packages{% endblock %}
{% block action_button %}
{% if meta.can_edit %}
<div class="flex items-center gap-2">
<button
type="button"
class="btn btn-primary btn-sm"
id="new-package-button"
onclick="document.getElementById('new_package_modal').showModal(); return false;"
>
<svg
xmlns="http://www.w3.org/2000/svg"
width="24"
height="24"
viewBox="0 0 24 24"
fill="none"
stroke="currentColor"
stroke-width="2"
stroke-linecap="round"
stroke-linejoin="round"
class="lucide lucide-folder-plus-icon lucide-folder-plus"
>
<path d="M12 10v6" />
<path d="M9 13h6" />
<path
d="M20 20a2 2 0 0 0 2-2V8a2 2 0 0 0-2-2h-7.9a2 2 0 0 1-1.69-.9L9.6 3.9A2 2 0 0 0 7.93 3H4a2 2 0 0 0-2 2v13a2 2 0 0 0 2 2Z"
/>
</svg>
</button>
<div class="dropdown dropdown-end">
<div tabindex="0" role="button" class="btn btn-sm">
Import
<svg
xmlns="http://www.w3.org/2000/svg"
width="16"
height="16"
viewBox="0 0 24 24"
fill="none"
stroke="currentColor"
stroke-width="2"
stroke-linecap="round"
stroke-linejoin="round"
class="lucide lucide-chevron-down ml-1"
>
<path d="m6 9 6 6 6-6" />
</svg>
</div>
<ul
tabindex="-1"
class="dropdown-content menu bg-base-100 rounded-box z-50 w-56 p-2"
>
<li>
<a
role="button"
onclick="document.getElementById('import_package_modal').showModal(); return false;"
>
Import Package from JSON
</a>
</li>
<li>
<a
role="button"
onclick="document.getElementById('import_legacy_package_modal').showModal(); return false;"
>
Import Package from legacy JSON
</a>
</li>
</ul>
</div>
</div>
{% endif %}
{% endblock action_button %}
{% block action_modals %}
{% include "modals/collections/new_package_modal.html" %}
{% include "modals/collections/import_package_modal.html" %}
{% include "modals/collections/import_legacy_package_modal.html" %}
{% endblock action_modals %}
{% block description %}
<p>
A package contains pathways, rules, etc. and can reflect specific
experimental conditions.
</p>
<a
target="_blank"
href="https://wiki.envipath.org/index.php/packages"
class="link link-primary"
>
Learn more &gt;&gt;
</a>
{% endblock description %}