forked from enviPath/enviPy
wip
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@ -1,13 +1,41 @@
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import base64
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import requests
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from django.conf import settings as s
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from django.core.exceptions import BadRequest
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from django.http import HttpResponse
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from pydantic import BaseModel
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from django.shortcuts import redirect
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from utilities.chem import FormatConverter
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from bayer.models import PESCompound
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from epdb.logic import PackageManager
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from epdb.views import _anonymous_or_real
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from utilities.decorators import package_permission_required
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class PES(BaseModel):
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pass
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@package_permission_required()
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def create_pes(request, package_uuid):
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current_user = _anonymous_or_real(request)
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current_package = PackageManager.get_package_by_id(current_user, package_uuid)
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if request.method == "POST":
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compound_name = request.POST.get('compound-name')
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compound_description = request.POST.get('compound-description')
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pes_link = request.POST.get('pes-link')
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if pes_link:
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try:
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pes_data = fetch_pes(request, pes_link)
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except ValueError as e:
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return BadRequest(f"Could not fetch PES data for {pes_link}")
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pes = PESCompound.create(current_package, pes_data, compound_name, compound_description)
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return redirect(pes.url)
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else:
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return BadRequest("Please provide a PES link.")
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else:
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pass
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def fetch_pes(request, pes_url) -> dict:
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@ -19,28 +47,35 @@ def fetch_pes(request, pes_url) -> dict:
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from epauth.views import get_access_token_from_request
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token = get_access_token_from_request(request)
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if token:
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if token or True:
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for k, v in s.PES_API_MAPPING.items():
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if pes_url.startsWith(k):
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if pes_url.startswith(k):
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pes_id = pes_url.split('/')[-1]
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headers = {"Authorization": f"Bearer {token['access_token']}"}
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params = {"pes_reg_entity_corporate_id": pes_id}
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res = requests.get(v, headers=headers, params=params, proxies=proxies)
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try:
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res.raise_for_status()
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pes_data = res.json()
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if len(pes_data) == 0:
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raise ValueError(f"PES with id {pes_id} not found")
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res_data = pes_data[0]
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if pes_id == 'dummy' or True:
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import json
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res_data = json.load(open(s.BASE_DIR / "fixtures/pes.json"))
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res_data["pes_url"] = pes_url
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return res_data
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else:
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headers = {"Authorization": f"Bearer {token['access_token']}"}
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params = {"pes_reg_entity_corporate_id": pes_id}
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except requests.exceptions.HTTPError as e:
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raise ValueError(f"Error fetching PES with id {pes_id}: {e}")
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res = requests.get(v, headers=headers, params=params, proxies=proxies)
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try:
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res.raise_for_status()
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pes_data = res.json()
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if len(pes_data) == 0:
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raise ValueError(f"PES with id {pes_id} not found")
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res_data = pes_data[0]
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res_data["pes_url"] = pes_url
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return res_data
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except requests.exceptions.HTTPError as e:
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raise ValueError(f"Error fetching PES with id {pes_id}: {e}")
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else:
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raise ValueError(f"Unknown URL {pes_url}")
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else:
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@ -52,8 +87,10 @@ def visualize_pes(request):
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if pes_link:
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pes_data = fetch_pes(request, pes_link)
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print(pes_data)
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return HttpResponse(
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FormatConverter.to_png("c1ccccc1"), content_type="image/png"
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)
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representations = pes_data.get('representations')
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for rep in representations:
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if rep.get('type') == 'color':
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image_data = base64.b64decode(rep.get('base64').replace("data:image/png;base64,", ""))
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return HttpResponse(image_data, content_type="image/png")
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