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Basic System (#31)

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Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#31
This commit is contained in:
jebus
2025-07-23 06:47:07 +12:00
parent 49e02ed97d
commit df896878f1
75 changed files with 3821 additions and 1429 deletions
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10
templates/actions/collections/compound.html
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@ -1,4 +1,6 @@
<li>
<a role="button" data-toggle="modal" data-target="#new_compound_modal">
<span class="glyphicon glyphicon-plus"></span> New Compound</a>
</li>
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#new_compound_modal">
<span class="glyphicon glyphicon-plus"></span> New Compound</a>
</li>
{% endif %}

10
templates/actions/collections/compound_structure.html
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@ -1,4 +1,6 @@
<li>
<a role="button" data-toggle="modal" data-target="#new_compound_structure_modal">
<span class="glyphicon glyphicon-plus"></span> New Compound Structure</a>
</li>
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#new_compound_structure_modal">
<span class="glyphicon glyphicon-plus"></span> New Compound Structure</a>
</li>
{% endif %}

6
templates/actions/collections/edge.html Normal file
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@ -0,0 +1,6 @@
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#new_edge_modal">
<span class="glyphicon glyphicon-plus"></span> New Edge</a>
</li>
{% endif %}

2
templates/actions/collections/group.html
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@ -1,4 +1,4 @@
<li>
<a role="button" data-toggle="modal" data-target="#new_group_modal">
<span class="glyphicon glyphicon-plus"></span> New Group</a>
</li>
</li>

10
templates/actions/collections/model.html
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@ -1,4 +1,6 @@
<li>
<a role="button" data-toggle="modal" data-target="#new_model_modal">
<span class="glyphicon glyphicon-plus"></span> New Model</a>
</li>
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#new_model_modal">
<span class="glyphicon glyphicon-plus"></span> New Model</a>
</li>
{% endif %}

6
templates/actions/collections/node.html Normal file
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@ -0,0 +1,6 @@
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#new_node_modal">
<span class="glyphicon glyphicon-plus"></span> New Node</a>
</li>
{% endif %}

10
templates/actions/collections/pathway.html
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@ -1,4 +1,6 @@
<li>
<a role="button" data-toggle="modal" data-target="#predict_modal">
<span class="glyphicon glyphicon-plus"></span> New Pathway</a>
</li>
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#predict_modal">
<span class="glyphicon glyphicon-plus"></span> New Pathway</a>
</li>
{% endif %}

10
templates/actions/collections/reaction.html
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@ -1,4 +1,6 @@
<li>
<a role="button" data-toggle="modal" data-target="#new_reaction_modal">
<span class="glyphicon glyphicon-plus"></span> New Reaction</a>
</li>
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#new_reaction_modal">
<span class="glyphicon glyphicon-plus"></span> New Reaction</a>
</li>
{% endif %}

10
templates/actions/collections/rule.html
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@ -1,4 +1,6 @@
<li>
<a role="button" data-toggle="modal" data-target="#new_rule_modal">
<span class="glyphicon glyphicon-plus"></span> New Rule</a>
</li>
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#new_rule_modal">
<span class="glyphicon glyphicon-plus"></span> New Rule</a>
</li>
{% endif %}

10
templates/actions/collections/scenario.html
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@ -1,4 +1,6 @@
<li>
<a role="button" data-toggle="modal" data-target="#new_pathway_modal">
<span class="glyphicon glyphicon-plus"></span> New Scenario</a>
</li>
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#new_pathway_modal">
<span class="glyphicon glyphicon-plus"></span> New Scenario</a>
</li>
{% endif %}

10
templates/actions/collections/setting.html
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@ -1,4 +1,6 @@
<li>
<a role="button" data-toggle="modal" data-target="#new_setting_modal">
<span class="glyphicon glyphicon-plus"></span>New Setting</a>
</li>
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#new_setting_modal">
<span class="glyphicon glyphicon-plus"></span>New Setting</a>
</li>
{% endif %}

26
templates/actions/objects/compound.html
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@ -1,12 +1,14 @@
<li>
<a role="button" data-toggle="modal" data-target="#edit_compound_modal">
<i class="glyphicon glyphicon-edit"></i> Edit Compound</a>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#add_structure_modal">
<i class="glyphicon glyphicon-plus"></i> Add Structure</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#delete_compound_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Compound</a>
</li>
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#edit_compound_modal">
<i class="glyphicon glyphicon-edit"></i> Edit Compound</a>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#add_structure_modal">
<i class="glyphicon glyphicon-plus"></i> Add Structure</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#delete_compound_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Compound</a>
</li>
{% endif %}

18
templates/actions/objects/compound_structure.html
View File

@ -1,8 +1,10 @@
<li>
<a role="button" data-toggle="modal" data-target="#edit_compound_structure_modal">
<i class="glyphicon glyphicon-edit"></i> Edit Compound Structure</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#delete_compound_structure_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Compound Structure</a>
</li>
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#edit_compound_structure_modal">
<i class="glyphicon glyphicon-edit"></i> Edit Compound Structure</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#delete_compound_structure_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Compound Structure</a>
</li>
{% endif %}

18
templates/actions/objects/group.html
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@ -1,8 +1,10 @@
<li>
<a role="button" data-toggle="modal" data-target="#delete_group_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Group</a>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#edit_group_member_modal">
<i class="glyphicon glyphicon-trash"></i> Add/Remove Member</a>
</li>
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#delete_group_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Group</a>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#edit_group_member_modal">
<i class="glyphicon glyphicon-trash"></i> Add/Remove Member</a>
</li>
{% endif %}

6
templates/actions/objects/model.html Normal file
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@ -0,0 +1,6 @@
{% if meta.can_edit %}
<li>
<a class="button" data-toggle="modal" data-target="#delete_model_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Model</a>
</li>
{% endif %}

10
templates/actions/objects/node.html Normal file
View File

@ -0,0 +1,10 @@
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#edit_node_modal">
<i class="glyphicon glyphicon-edit"></i> Edit Node</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#delete_node_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Node</a>
</li>
{% endif %}

34
templates/actions/objects/package.html
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@ -1,16 +1,18 @@
<li>
<a role="button" data-toggle="modal" data-target="#edit_package_modal">
<i class="glyphicon glyphicon-edit"></i> Edit Package</a>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#edit_package_permissions_modal">
<i class="glyphicon glyphicon-user"></i> Edit Permissions</a>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#set_license_modal">
<i class="glyphicon glyphicon-duplicate"></i> License</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#delete_package_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Package</a>
</li>
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#edit_package_modal">
<i class="glyphicon glyphicon-edit"></i> Edit Package</a>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#edit_package_permissions_modal">
<i class="glyphicon glyphicon-user"></i> Edit Permissions</a>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#set_license_modal">
<i class="glyphicon glyphicon-duplicate"></i> License</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#delete_package_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Package</a>
</li>
{% endif %}

40
templates/actions/objects/pathway.html
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@ -1,8 +1,32 @@
<li>
<a role="button" data-toggle="modal" data-target="#edit_pathway_modal">
<i class="glyphicon glyphicon-edit"></i> Edit Pathway</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#delete_pathawy_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Pathway</a>
</li>
{% if meta.can_edit %}
<li>
<a class="button" data-toggle="modal" data-target="#add_pathway_node_modal">
<i class="glyphicon glyphicon-plus"></i> Add Compound</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#add_pathway_edge_modal">
<i class="glyphicon glyphicon-plus"></i> Add Reaction</a>
</li>
<li role="separator" class="divider"></li>
<li>
<a class="button" data-toggle="modal" data-target="#edit_pathway_modal">
<i class="glyphicon glyphicon-plus"></i> Edit Pathway</a>
</li>
{# <li>#}
{# <a class="button" data-toggle="modal" data-target="#add_pathway_edge_modal">#}
{# <i class="glyphicon glyphicon-plus"></i> Calculate Compound Properties</a>#}
{# </li>#}
<li role="separator" class="divider"></li>
<li>
<a class="button" data-toggle="modal" data-target="#delete_pathway_node_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Compound</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#delete_pathway_edge_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Reaction</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#delete_pathway_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Pathway</a>
</li>
{% endif %}

18
templates/actions/objects/reaction.html
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@ -1,8 +1,10 @@
<li>
<a role="button" data-toggle="modal" data-target="#edit_reaction_modal">
<i class="glyphicon glyphicon-edit"></i> Edit Reaction</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#delete_reaction_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Reaction</a>
</li>
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#edit_reaction_modal">
<i class="glyphicon glyphicon-edit"></i> Edit Reaction</a>
</li>
<li>
<a class="button" data-toggle="modal" data-target="#delete_reaction_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Reaction</a>
</li>
{% endif %}

10
templates/actions/objects/rule.html
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@ -1,4 +1,6 @@
<li>
<a role="button" data-toggle="modal" data-target="#edit_rule_modal">
<i class="glyphicon glyphicon-edit"></i> Edit Rule</a>
</li>
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#edit_rule_modal">
<i class="glyphicon glyphicon-edit"></i> Edit Rule</a>
</li>
{% endif %}

2
templates/actions/objects/scenario.html
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@ -0,0 +1,2 @@
{% if meta.can_edit %}
{% endif %}

42
templates/actions/objects/user.html
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@ -1,20 +1,22 @@
<li>
<a role="button" data-toggle="modal" data-target="#edit_user_modal">
<i class="glyphicon glyphicon-edit"></i> Update</a>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#edit_password_modal">
<i class="glyphicon glyphicon-lock"></i> Update Password</a>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#new_prediction_setting_modal">
<i class="glyphicon glyphicon-plus"></i> New Prediction Setting</a>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#manage_api_token_modal">
<i class="glyphicon glyphicon-console"></i> Manage API Token</a>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#delete_user_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Account</a>
</li>
{% if meta.can_edit %}
<li>
<a role="button" data-toggle="modal" data-target="#edit_user_modal">
<i class="glyphicon glyphicon-edit"></i> Update</a>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#edit_password_modal">
<i class="glyphicon glyphicon-lock"></i> Update Password</a>
</li>
<li>
<a role="button" data-toggle="modal" data-target="#new_prediction_setting_modal">
<i class="glyphicon glyphicon-plus"></i> New Prediction Setting</a>
</li>
{# <li>#}
{# <a role="button" data-toggle="modal" data-target="#manage_api_token_modal">#}
{# <i class="glyphicon glyphicon-console"></i> Manage API Token</a>#}
{# </li>#}
<li>
<a role="button" data-toggle="modal" data-target="#delete_user_modal">
<i class="glyphicon glyphicon-trash"></i> Delete Account</a>
</li>
{% endif %}