d51f842203
adjusted migration
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API CI / api-tests (pull_request) Failing after 23s
CI / test (pull_request) Failing after 25s
Initial bayer app
Show Pack Classification
Adjusted docker compose to bayer specifics
Adjusted Dockerfile for Bayer
Adding secret flags to group, add secret pools to packages
Adjusted View for Package creation
Prep configs, added Package Create Modal
wip
More on PES
wip
wip
Wip
minor
PW interactions
API PES
wip
Make Select Widget reflect required
make required generallay available
Update UI if pathway mode is set to build
Added ais
circle adjustments
Initial Zoom, fix AD Creation
wip
auth log, bb4g fix
missing import
Added viz hint if PES is part of reaction
Add Edge check for pes
flip boolean
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pes
Added extra
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In / Out Edges Viz, Submitting Button Text
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Make PES Link clickable
Return proper http response instead of error
Fixed error return, removed unused options
Fix PES Link HTML for other entities
Fixed molfile assignment, adjusted Export
Package Export/Import cycle
highlight Description links
implemented non persistent
Harmonised proposed field in Json output
Added pesLink field to PW Api output
PES Fields in API Output
removed debug
Fix Classification import, Fix PES Deserialization
underline pes link in templates
Fix alter name/desc for node, make /node /edge funcitonal
provide setting link and copy button
Implemented Compound Names / Reaction Names View Option
Unconnected Nodes
Make links thicker, reduce timeout trigger time
Show proposed info in popover
Pathway Build no stereo removal
Include probs in reaction name option viz
Detect clicks outside nodes/edges
2026-07-15 13:50:27 +02:00
dba6514013
[Chore] Package Export, Blanks for fields, Styling ( #421 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#421
2026-07-02 20:12:26 +12:00
868bbf5c05
[Fix] False as multi_step default in legacy API ( #406 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#406
2026-05-29 08:12:52 +12:00
be5ee1d1d7
[Fix] Propagate multi_step in Edge.create to Reaction.create to ensure deduplication is working ( #405 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#405
2026-05-29 07:39:32 +12:00
1a9f1cf9af
[Fix] Legacy API Node Depth Parsing, description validation in Reaction.create ( #402 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#402
2026-05-28 09:53:39 +12:00
c7c7e17e43
[Feature] Implement legacy endpoints to enable copy via python client ( #400 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#400
2026-05-28 01:41:28 +12:00
674e10c7fa
[Fix] Legacy API Package Endpoint, Pepper Unit in Pathway View ( #399 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#399
2026-05-27 21:09:17 +12:00
8079b80d57
[Fix] Fix Typo in multi_step assignment ( #397 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#397
2026-05-21 09:56:21 +12:00
76e63fda2c
[Fix] Fix BART Upload ( #396 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#396
2026-05-21 03:16:02 +12:00
b39fc7eaf8
[Fix] Update Node depth when adding new Edges to a Pathway ( #384 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#384
2026-05-12 09:40:35 +12:00
8498e59fa1
[Feature] Changes required for non public tenants ( #370 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#370
2026-04-22 06:08:39 +12:00
f7c45b8015
[Feature] Add legacy api endpoint to mimic ReferringScenarios ( #362 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#362
2026-03-17 19:44:47 +13:00
e0764126e3
[Fix] Scenario Review Status + Depth issues ( #351 )
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https://envipath.org/api/legacy/package/32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/pathway/1d537657-298c-496b-9e6f-2bec0cbe0678
-> Node.depth can be float for Dummynodes
-> Scenarios in Edge.d3_json were lacking a reviewed flag
Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#351
2026-03-12 08:28:20 +13:00
b737fc93eb
[Feature] Search for Permissions, Prep Compound / Structure to be extended, Prep Template overwrites ( #347 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#347
2026-03-11 11:27:15 +13:00
6e00926371
[Feature] Scenario and Additional Information creation via enviPath-python, Add Half Lifes to API Output, Fix source/target ids in legacy API ( #340 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#340
2026-03-06 07:20:18 +13:00
cc9598775c
[Fix] Fix Perm for creating entities ( #341 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#341
2026-02-27 03:56:33 +13:00
d2c2e643cb
[Fix] Compound Grouping, Identity prediction of enviFormer, Setting params ( #337 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#337
2026-02-20 10:14:28 +13:00
5565b9cb9e
[Fix] UI bugs, Registrations Mail, BTRules Popup, Legacy API fixes ( #309 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#309
2026-01-29 11:13:34 +13:00
ab0b5a5186
[Feature] Leftovers after Release ( #303 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#303
2026-01-22 10:26:38 +13:00
5f5ae76182
[Fix] Fix Prediction Spinner, ensure proper pathway status is set
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Fixes Spinner and status message display on pathway page
Reviewed-on: enviPath/enviPy#291
Co-authored-by: Tobias O <tobias.olenyi@envipath.com >
Co-committed-by: Tobias O <tobias.olenyi@envipath.com >
2026-01-15 23:09:12 +13:00
54f8302104
[FIX] Fixed Search Output, Legacy API Model Endpoint, Handle ObjectsDoesNotExists in views ( #297 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#297
2026-01-15 20:39:54 +13:00
d2d475b990
[Feature] Show Multi Gen Eval + Batch Prediction ( #267 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#267
2025-12-15 08:48:28 +13:00
648ec150a9
[Feature] Engineer Pathway ( #256 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#256
2025-12-10 07:35:42 +13:00
b6c35fea76
[Feature] Search API Endpoint ( #227 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#227
2025-11-20 09:56:11 +13:00
67b1baa5b0
[Feature] Legacy API ( #224 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#224
2025-11-19 20:45:16 +13:00
a8554c903c
[Enhancement] Swappable Packages ( #216 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#216
Reviewed-by: liambrydon <lbry121@aucklanduni.ac.nz >
Reviewed-by: Tobias O <tobias.olenyi@envipath.com >
2025-11-14 21:42:39 +13:00
afeb56622c
[Chore] Linted Files ( #150 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#150
2025-10-09 07:25:13 +13:00
3f2b046bd6
[Feature] More on Legacy API ( #142 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#142
2025-10-03 00:07:30 +13:00
4158bd36cb
[Feature] Legacy API Layer ( #80 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#80
2025-09-03 01:35:51 +12:00
