forked from enviPath/enviPy
322 lines
11 KiB
HTML
322 lines
11 KiB
HTML
{% extends "framework_modern.html" %}
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{% block content %}
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{% block action_modals %}
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{% include "modals/objects/edit_compound_modal.html" %}
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{% include "modals/objects/generic_set_aliases_modal.html" %}
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{% include "modals/objects/add_structure_modal.html" %}
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{% include "modals/objects/generic_set_scenario_modal.html" %}
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{% include "modals/objects/generic_set_external_reference_modal.html" %}
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{% include "modals/objects/generic_copy_object_modal.html" %}
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{% include "modals/objects/generic_delete_modal.html" %}
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{% endblock action_modals %}
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<div class="space-y-2 p-4">
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<!-- Header Section -->
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<div class="card bg-base-100">
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<div class="card-body">
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<div class="flex items-center justify-between">
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<h2 class="card-title text-2xl">{{ compound.name }}</h2>
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<div id="actionsButton" class="dropdown dropdown-end hidden">
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<div tabindex="0" role="button" class="btn btn-ghost btn-sm">
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<svg
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xmlns="http://www.w3.org/2000/svg"
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width="16"
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height="16"
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viewBox="0 0 24 24"
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fill="none"
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stroke="currentColor"
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stroke-width="2"
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stroke-linecap="round"
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stroke-linejoin="round"
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class="lucide lucide-wrench"
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>
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<path
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d="M14.7 6.3a1 1 0 0 0 0 1.4l1.6 1.6a1 1 0 0 0 1.4 0l3.77-3.77a6 6 0 0 1-7.94 7.94l-6.91 6.91a2.12 2.12 0 0 1-3-3l6.91-6.91a6 6 0 0 1 7.94-7.94l-3.76 3.76z"
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/>
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</svg>
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Actions
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</div>
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<ul
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tabindex="-1"
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class="dropdown-content menu bg-base-100 rounded-box z-50 w-52 p-2"
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>
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{% block actions %}
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{% include "actions/objects/compound.html" %}
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{% endblock %}
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</ul>
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</div>
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</div>
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<p class="mt-2">
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The structures stored in this compound can be found at
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<a
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target="_blank"
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href="{{ compound.url }}/structure"
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class="link link-primary"
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>Compound structures >></a
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>
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</p>
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</div>
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</div>
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{% if compound.aliases %}
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<!-- Aliases -->
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<div class="collapse-arrow bg-base-200 collapse">
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<input type="checkbox" checked />
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<div class="collapse-title text-xl font-medium">Aliases</div>
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<div class="collapse-content">
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<ul class="menu bg-base-100 rounded-box">
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{% for alias in compound.aliases %}
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<li><a class="hover:bg-base-200">{{ alias }}</a></li>
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{% endfor %}
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</ul>
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</div>
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</div>
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{% endif %}
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<!-- Description -->
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<div class="collapse-arrow bg-base-200 collapse">
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<input type="checkbox" checked />
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<div class="collapse-title text-xl font-medium">Description</div>
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<div class="collapse-content">{{ compound.description }}</div>
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</div>
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<!-- Image Representation -->
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<div class="collapse-arrow bg-base-200 collapse">
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<input type="checkbox" checked />
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<div class="collapse-title text-xl font-medium">Image Representation</div>
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<div class="collapse-content">
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<div class="flex justify-center">
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{{ compound.default_structure.as_svg|safe }}
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</div>
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</div>
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</div>
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<!-- SMILES Representation -->
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<div class="collapse-arrow bg-base-200 collapse">
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<input type="checkbox" checked />
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<div class="collapse-title text-xl font-medium">
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SMILES Representation
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</div>
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<div class="collapse-content">
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{{ compound.default_structure.smiles }}
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</div>
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</div>
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<!-- Canonical SMILES Representation -->
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<div class="collapse-arrow bg-base-200 collapse">
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<input type="checkbox" checked />
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<div class="collapse-title text-xl font-medium">
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Canonical SMILES Representation
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</div>
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<div class="collapse-content">
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{{ compound.default_structure.canonical_smiles }}
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</div>
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</div>
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<!-- InChIKey -->
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<div class="collapse-arrow bg-base-200 collapse">
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<input type="checkbox" checked />
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<div class="collapse-title text-xl font-medium">InChIKey</div>
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<div class="collapse-content">
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{{ compound.default_structure.inchikey }}
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</div>
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</div>
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<!-- Reactions -->
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{% if compound.related_reactions %}
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<div class="collapse-arrow bg-base-200 collapse">
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<input type="checkbox" checked />
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<div class="collapse-title text-xl font-medium">Reactions</div>
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<div class="collapse-content">
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<ul class="menu bg-base-100 rounded-box">
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{% for r in compound.related_reactions %}
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<li>
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<a href="{{ r.url }}" class="hover:bg-base-200"
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>{{ r.name }} <i>({{ r.package.name }})</i></a
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>
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</li>
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{% endfor %}
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</ul>
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</div>
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</div>
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{% endif %}
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<!-- Pathways -->
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{% if compound.related_pathways %}
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<div class="collapse-arrow bg-base-200 collapse">
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<input type="checkbox" checked />
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<div class="collapse-title text-xl font-medium">Pathways</div>
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<div class="collapse-content">
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<ul class="menu bg-base-100 rounded-box">
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{% for r in compound.related_pathways %}
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<li>
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<a href="{{ r.url }}" class="hover:bg-base-200"
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>{{ r.name }} <i>({{ r.package.name }})</i></a
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>
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</li>
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{% endfor %}
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</ul>
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</div>
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</div>
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{% endif %}
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<!-- Scenarios -->
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{% if compound.scenarios.all %}
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<div class="collapse-arrow bg-base-200 collapse">
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<input type="checkbox" checked />
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<div class="collapse-title text-xl font-medium">Scenarios</div>
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<div class="collapse-content">
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<ul class="menu bg-base-100 rounded-box">
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{% for s in compound.scenarios.all %}
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<li>
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<a href="{{ s.url }}" class="hover:bg-base-200"
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>{{ s.name }} <i>({{ s.package.name }})</i></a
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>
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</li>
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{% endfor %}
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</ul>
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</div>
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</div>
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{% endif %}
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{% if compound.half_lifes %}
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<div class="collapse-arrow bg-base-200 collapse">
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<input type="checkbox" />
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<div class="collapse-title text-xl font-medium">Half-lives</div>
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<div class="collapse-content">
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<div class="overflow-x-auto">
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<table class="table-zebra table">
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<thead>
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<tr>
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<th>Scenario</th>
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<th>Values</th>
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</tr>
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</thead>
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<tbody>
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{% for scenario, half_lifes in compound.half_lifes.items %}
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<tr>
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<td>
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<a href="{{ scenario.url }}" class="hover:bg-base-200"
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>{{ scenario.name }}
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<i>({{ scenario.package.name }})</i></a
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>
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</td>
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<td>
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<table class="table-zebra table">
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<tbody>
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<tr>
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<td>Scenario Type</td>
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<td>{{ scenario.scenario_type }}</td>
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</tr>
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<tr>
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<td>Half-life (days)</td>
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<td>{{ half_lifes.0.dt50 }}</td>
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</tr>
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<tr>
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<td>Model</td>
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<td>{{ half_lifes.0.model }}</td>
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</tr>
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</tbody>
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</table>
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</td>
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</tr>
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{% endfor %}
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</tbody>
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</table>
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</div>
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</div>
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</div>
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{% endif %}
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<!-- External Identifiers -->
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{% if compound.get_external_identifiers %}
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<div class="collapse-arrow bg-base-200 collapse">
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<input type="checkbox" checked />
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<div class="collapse-title text-xl font-medium">
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External Identifier
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</div>
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<div class="collapse-content">
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<div class="space-y-2">
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{% if compound.get_pubchem_compound_identifiers %}
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<div class="collapse-arrow bg-base-100 collapse">
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<input type="checkbox" checked />
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<div class="collapse-title text-lg font-medium">
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PubChem Compound Identifier
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</div>
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<div class="collapse-content">
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<ul class="menu bg-base-200 rounded-box">
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{% for eid in compound.get_pubchem_compound_identifiers %}
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<li>
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<a
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href="{{ eid.external_url }}"
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class="hover:bg-base-300"
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>CID{{ eid.identifier_value }}</a
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>
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</li>
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{% endfor %}
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</ul>
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</div>
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</div>
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{% endif %}
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{% if compound.get_pubchem_substance_identifiers %}
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<div class="collapse-arrow bg-base-100 collapse">
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<input type="checkbox" checked />
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<div class="collapse-title text-lg font-medium">
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PubChem Substance Identifier
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</div>
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<div class="collapse-content">
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<ul class="menu bg-base-200 rounded-box">
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{% for eid in compound.get_pubchem_substance_identifiers %}
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<li>
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<a
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href="{{ eid.external_url }}"
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class="hover:bg-base-300"
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>SID{{ eid.identifier_value }}</a
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>
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</li>
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{% endfor %}
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</ul>
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</div>
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</div>
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{% endif %}
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{% if compound.get_chebi_identifiers %}
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<div class="collapse-arrow bg-base-100 collapse">
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<input type="checkbox" checked />
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<div class="collapse-title text-lg font-medium">
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ChEBI Identifier
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</div>
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<div class="collapse-content">
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<ul class="menu bg-base-200 rounded-box">
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{% for eid in compound.get_chebi_identifiers %}
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<li>
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<a
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href="{{ eid.external_url }}"
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class="hover:bg-base-300"
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>CHEBI:{{ eid.identifier_value }}</a
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>
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</li>
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{% endfor %}
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</ul>
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</div>
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</div>
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{% endif %}
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</div>
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</div>
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</div>
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{% endif %}
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</div>
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<script>
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// Show actions button if there are actions
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document.addEventListener("DOMContentLoaded", function () {
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const actionsButton = document.getElementById("actionsButton");
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const actionsList = actionsButton?.querySelector("ul");
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if (actionsList && actionsList.children.length > 0) {
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actionsButton?.classList.remove("hidden");
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}
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});
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</script>
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{% endblock content %}
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