forked from enviPath/enviPy
114 lines
4.1 KiB
Python
114 lines
4.1 KiB
Python
from django.test import TestCase, override_settings
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from django.urls import reverse
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from django.conf import settings as s
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from epdb.logic import UserManager, PackageManager
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from epdb.models import Pathway, Edge, Package, User
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@override_settings(MODEL_DIR=s.FIXTURE_DIRS[0] / "models")
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class PathwayViewTest(TestCase):
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fixtures = ["test_fixtures_incl_model.jsonl.gz"]
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@classmethod
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def setUpClass(cls):
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super(PathwayViewTest, cls).setUpClass()
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cls.user1 = UserManager.create_user("user1", "user1@envipath.com", "SuperSafe",
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set_setting=True, add_to_group=True, is_active=True)
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cls.user1_default_package = cls.user1.default_package
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cls.model_package = Package.objects.get(name='Fixtures')
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def setUp(self):
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self.client.force_login(self.user1)
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def test_predict(self):
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self.client.force_login(User.objects.get(username="admin"))
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response = self.client.get(
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reverse("package model detail", kwargs={
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'package_uuid': str(self.model_package.uuid),
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'model_uuid': str(self.model_package.models.first().uuid)
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}), {
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'classify': 'ILikeCats!',
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'smiles': 'CCN(CC)C(=O)C1=CC(=CC=C1)CO',
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}
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)
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expected = [
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{
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'products': [
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[
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'O=C(O)C1=CC(CO)=CC=C1',
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'CCNCC'
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]
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],
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'probability': 0.25,
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'btrule': {
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'url': 'http://localhost:8000/package/1869d3f0-60bb-41fd-b6f8-afa75ffb09d3/simple-ambit-rule/0e6e9290-b658-4450-b291-3ec19fa19206',
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'name': 'bt0430-4011'
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}
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}, {
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'products': [
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[
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'CCNC(=O)C1=CC(CO)=CC=C1',
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'CC=O'
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]
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], 'probability': 0.0,
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'btrule': {
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'url': 'http://localhost:8000/package/1869d3f0-60bb-41fd-b6f8-afa75ffb09d3/simple-ambit-rule/27a3a353-0b66-4228-bd16-e407949e90df',
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'name': 'bt0243-4301'
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}
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}, {
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'products': [
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[
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'CCN(CC)C(=O)C1=CC(C=O)=CC=C1'
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]
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], 'probability': 0.75,
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'btrule': {
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'url': 'http://localhost:8000/package/1869d3f0-60bb-41fd-b6f8-afa75ffb09d3/simple-ambit-rule/2f2e0c39-e109-4836-959f-2bda2524f022',
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'name': 'bt0001-3568'
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}
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}
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]
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actual = response.json()
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self.assertEqual(actual, expected)
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response = self.client.get(
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reverse("package model detail", kwargs={
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'package_uuid': str(self.model_package.uuid),
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'model_uuid': str(self.model_package.models.first().uuid)
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}), {
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'classify': 'ILikeCats!',
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'smiles': '',
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}
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)
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self.assertEqual(response.status_code, 400)
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self.assertEqual(response.json()['error'], 'Received empty SMILES')
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response = self.client.get(
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reverse("package model detail", kwargs={
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'package_uuid': str(self.model_package.uuid),
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'model_uuid': str(self.model_package.models.first().uuid)
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}), {
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'classify': 'ILikeCats!',
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'smiles': ' ', # Input should be stripped
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}
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)
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self.assertEqual(response.status_code, 400)
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self.assertEqual(response.json()['error'], 'Received empty SMILES')
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response = self.client.get(
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reverse("package model detail", kwargs={
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'package_uuid': str(self.model_package.uuid),
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'model_uuid': str(self.model_package.models.first().uuid)
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}), {
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'classify': 'ILikeCats!',
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'smiles': 'RandomInput',
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}
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)
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self.assertEqual(response.status_code, 400)
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self.assertEqual(response.json()['error'], '"RandomInput" is not a valid SMILES')
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