forked from enviPath/enviPy
271 lines
9.7 KiB
HTML
271 lines
9.7 KiB
HTML
{% extends "framework_modern.html" %}
|
|
|
|
{% block content %}
|
|
|
|
{% block action_modals %}
|
|
{% include "modals/objects/edit_reaction_modal.html" %}
|
|
{% include "modals/objects/generic_set_aliases_modal.html" %}
|
|
{% include "modals/objects/generic_set_scenario_modal.html" %}
|
|
{% include "modals/objects/generic_copy_object_modal.html" %}
|
|
{% include "modals/objects/generic_set_external_reference_modal.html" %}
|
|
{% include "modals/objects/generic_delete_modal.html" %}
|
|
{% endblock action_modals %}
|
|
|
|
<div class="space-y-2 p-4">
|
|
<!-- Header Section -->
|
|
<div class="card bg-base-100">
|
|
<div class="card-body">
|
|
<div class="flex items-center justify-between">
|
|
<h2 class="card-title text-2xl">{{ reaction.name }}</h2>
|
|
<div id="actionsButton" class="dropdown dropdown-end hidden">
|
|
<div tabindex="0" role="button" class="btn btn-ghost btn-sm">
|
|
<svg
|
|
xmlns="http://www.w3.org/2000/svg"
|
|
width="16"
|
|
height="16"
|
|
viewBox="0 0 24 24"
|
|
fill="none"
|
|
stroke="currentColor"
|
|
stroke-width="2"
|
|
stroke-linecap="round"
|
|
stroke-linejoin="round"
|
|
class="lucide lucide-wrench"
|
|
>
|
|
<path
|
|
d="M14.7 6.3a1 1 0 0 0 0 1.4l1.6 1.6a1 1 0 0 0 1.4 0l3.77-3.77a6 6 0 0 1-7.94 7.94l-6.91 6.91a2.12 2.12 0 0 1-3-3l6.91-6.91a6 6 0 0 1 7.94-7.94l-3.76 3.76z"
|
|
/>
|
|
</svg>
|
|
Actions
|
|
</div>
|
|
<ul
|
|
tabindex="-1"
|
|
class="dropdown-content menu bg-base-100 rounded-box z-50 w-52 p-2"
|
|
>
|
|
{% block actions %}
|
|
{% include "actions/objects/reaction.html" %}
|
|
{% endblock %}
|
|
</ul>
|
|
</div>
|
|
</div>
|
|
</div>
|
|
</div>
|
|
|
|
<!-- Description -->
|
|
<div class="collapse-arrow bg-base-200 collapse">
|
|
<input type="checkbox" checked />
|
|
<div class="collapse-title text-xl font-medium">Description</div>
|
|
<div class="collapse-content">{{ reaction.description }}</div>
|
|
</div>
|
|
|
|
{% if reaction.aliases %}
|
|
<!-- Aliases -->
|
|
<div class="collapse-arrow bg-base-200 collapse">
|
|
<input type="checkbox" checked />
|
|
<div class="collapse-title text-xl font-medium">Aliases</div>
|
|
<div class="collapse-content">
|
|
<ul class="menu bg-base-100 rounded-box">
|
|
{% for alias in reaction.aliases %}
|
|
<li><a class="hover:bg-base-200">{{ alias }}</a></li>
|
|
{% endfor %}
|
|
</ul>
|
|
</div>
|
|
</div>
|
|
{% endif %}
|
|
|
|
<!-- Image Representation -->
|
|
<div class="collapse-arrow bg-base-200 collapse">
|
|
<input type="checkbox" checked />
|
|
<div class="collapse-title text-xl font-medium">Image Representation</div>
|
|
<div class="collapse-content">
|
|
<div class="flex justify-center">{{ reaction.as_svg|safe }}</div>
|
|
</div>
|
|
{% if reaction.contains_pes %}
|
|
<span class='alert alert-info alert-soft'>The reaction contains a partially elucidated structure!</br>For visualization the representative structure is used. The pathway itself will show the actual partially elucidated structure.</span>
|
|
{% endif %}
|
|
</div>
|
|
|
|
<!-- Reaction Description -->
|
|
<div class="collapse-arrow bg-base-200 collapse">
|
|
<input type="checkbox" checked />
|
|
<div class="collapse-title text-xl font-medium">Reaction Description</div>
|
|
<div class="collapse-content">
|
|
<div class="flex flex-wrap items-center justify-center gap-4">
|
|
{% for educt in reaction.educts.all %}
|
|
<a href="{{ educt.url }}" class="btn btn-outline btn-sm"
|
|
>{{ educt.name }}</a
|
|
>
|
|
{% endfor %}
|
|
<svg
|
|
xmlns="http://www.w3.org/2000/svg"
|
|
width="24"
|
|
height="24"
|
|
viewBox="0 0 24 24"
|
|
fill="none"
|
|
stroke="currentColor"
|
|
stroke-width="2"
|
|
stroke-linecap="round"
|
|
stroke-linejoin="round"
|
|
class="lucide lucide-arrow-right"
|
|
>
|
|
<path d="M5 12h14" />
|
|
<path d="m12 5 7 7-7 7" />
|
|
</svg>
|
|
{% for product in reaction.products.all %}
|
|
<a href="{{ product.url }}" class="btn btn-outline btn-sm"
|
|
>{{ product.name }}</a
|
|
>
|
|
{% endfor %}
|
|
</div>
|
|
</div>
|
|
</div>
|
|
|
|
<!-- SMIRKS Representation -->
|
|
<div class="collapse-arrow bg-base-200 collapse">
|
|
<input type="checkbox" checked />
|
|
<div class="collapse-title text-xl font-medium">
|
|
SMIRKS Representation
|
|
</div>
|
|
<div class="collapse-content">{{ reaction.smirks }}</div>
|
|
</div>
|
|
|
|
<!-- Rules -->
|
|
{% if reaction.rules.all %}
|
|
<div class="collapse-arrow bg-base-200 collapse">
|
|
<input type="checkbox" checked />
|
|
<div class="collapse-title text-xl font-medium">Rules</div>
|
|
<div class="collapse-content">
|
|
<ul class="menu bg-base-100 rounded-box">
|
|
{% for r in reaction.rules.all %}
|
|
<li>
|
|
<a href="{{ r.url }}" class="hover:bg-base-200">{{ r.name }}</a>
|
|
</li>
|
|
{% endfor %}
|
|
</ul>
|
|
</div>
|
|
</div>
|
|
{% endif %}
|
|
|
|
<!-- EC Numbers -->
|
|
{% if reaction.get_related_enzymes %}
|
|
<div class="collapse-arrow bg-base-200 collapse">
|
|
<input type="checkbox" checked />
|
|
<div class="collapse-title text-xl font-medium">EC Numbers</div>
|
|
<div class="collapse-content">
|
|
<ul class="menu bg-base-100 rounded-box">
|
|
{% for e in reaction.get_related_enzymes %}
|
|
<li>
|
|
<a
|
|
href="http://www.brenda-enzymes.org/enzyme.php?ecno={{ e.ec_number }}"
|
|
class="hover:bg-base-200"
|
|
>{{ e.name }}</a
|
|
>
|
|
</li>
|
|
{% endfor %}
|
|
</ul>
|
|
</div>
|
|
</div>
|
|
{% endif %}
|
|
|
|
<!-- Pathways -->
|
|
{% if reaction.related_pathways %}
|
|
<div class="collapse-arrow bg-base-200 collapse">
|
|
<input type="checkbox" checked />
|
|
<div class="collapse-title text-xl font-medium">Pathways</div>
|
|
<div class="collapse-content">
|
|
<ul class="menu bg-base-100 rounded-box">
|
|
{% for r in reaction.related_pathways %}
|
|
<li>
|
|
<a href="{{ r.url }}" class="hover:bg-base-200"
|
|
>{{ r.name }} <i>({{ r.package.name }})</i></a
|
|
>
|
|
</li>
|
|
{% endfor %}
|
|
</ul>
|
|
</div>
|
|
</div>
|
|
{% endif %}
|
|
|
|
<!-- Scenarios -->
|
|
{% if reaction.scenarios.all %}
|
|
<div class="collapse-arrow bg-base-200 collapse">
|
|
<input type="checkbox" checked />
|
|
<div class="collapse-title text-xl font-medium">Scenarios</div>
|
|
<div class="collapse-content">
|
|
<ul class="menu bg-base-100 rounded-box">
|
|
{% for s in reaction.scenarios.all %}
|
|
<li>
|
|
<a href="{{ s.url }}" class="hover:bg-base-200"
|
|
>{{ s.name }} <i>({{ s.package.name }})</i></a
|
|
>
|
|
</li>
|
|
{% endfor %}
|
|
</ul>
|
|
</div>
|
|
</div>
|
|
{% endif %}
|
|
|
|
<!-- External Identifiers -->
|
|
{% if reaction.get_external_identifiers %}
|
|
<div class="collapse-arrow bg-base-200 collapse">
|
|
<input type="checkbox" checked />
|
|
<div class="collapse-title text-xl font-medium">
|
|
External Identifier
|
|
</div>
|
|
<div class="collapse-content">
|
|
<div class="space-y-2">
|
|
{% if reaction.get_rhea_identifiers %}
|
|
<div class="collapse-arrow bg-base-100 collapse">
|
|
<input type="checkbox" checked />
|
|
<div class="collapse-title text-lg font-medium">Rhea</div>
|
|
<div class="collapse-content">
|
|
<ul class="menu bg-base-200 rounded-box">
|
|
{% for eid in reaction.get_rhea_identifiers %}
|
|
<li>
|
|
<a
|
|
href="{{ eid.external_url }}"
|
|
class="hover:bg-base-300"
|
|
>{{ eid.identifier_value }}</a
|
|
>
|
|
</li>
|
|
{% endfor %}
|
|
</ul>
|
|
</div>
|
|
</div>
|
|
{% endif %}
|
|
{% if reaction.get_uniprot_identifiers %}
|
|
<div class="collapse-arrow bg-base-100 collapse">
|
|
<input type="checkbox" checked />
|
|
<div class="collapse-title text-lg font-medium">UniProt</div>
|
|
<div class="collapse-content">
|
|
<ul class="menu bg-base-200 rounded-box">
|
|
{% for eid in reaction.get_uniprot_identifiers %}
|
|
<li>
|
|
<a
|
|
href="{{ eid.external_url }}"
|
|
class="hover:bg-base-300"
|
|
>10 SwissProt entries ({{ eid.identifier_value }})</a
|
|
>
|
|
</li>
|
|
{% endfor %}
|
|
</ul>
|
|
</div>
|
|
</div>
|
|
{% endif %}
|
|
</div>
|
|
</div>
|
|
</div>
|
|
{% endif %}
|
|
</div>
|
|
|
|
<script>
|
|
// Show actions button if there are actions
|
|
document.addEventListener("DOMContentLoaded", function () {
|
|
const actionsButton = document.getElementById("actionsButton");
|
|
const actionsList = actionsButton?.querySelector("ul");
|
|
if (actionsList && actionsList.children.length > 0) {
|
|
actionsButton?.classList.remove("hidden");
|
|
}
|
|
});
|
|
</script>
|
|
{% endblock content %}
|