Commit Graph

87 Commits

Author SHA1 Message Date
b9ac713cb2 minor 2025-11-11 11:41:48 +01:00
05bee9b718 mrg 2025-11-11 10:54:36 +01:00
34589efbde [Fix] Mitigate XSS attack vector by cleaning input before it hits our Database (#171)
## Changes

- All text input fields are now cleaned with nh3 to remove html tags. We allow certain html tags under `settings.py/ALLOWED_HTML_TAGS` so we can easily update the tags we allow in the future.
- All names and descriptions now use the template tag `nh_safe` in all html files.
- Usernames and emails are a small exception and are not allowed any html tags

Co-authored-by: Liam Brydon <62733830+MyCreativityOutlet@users.noreply.github.com>
Co-authored-by: jebus <lorsbach@envipath.com>
Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#171
Reviewed-by: jebus <lorsbach@envipath.com>
Co-authored-by: liambrydon <lbry121@aucklanduni.ac.nz>
Co-committed-by: liambrydon <lbry121@aucklanduni.ac.nz>
2025-11-11 22:49:55 +13:00
f5133c1980 fix: remove obsolete page id 2025-11-06 10:36:04 +13:00
7fbc49afd3 chore: update citations 2025-11-05 17:50:56 +13:00
a087a518f6 chore: remove incorrect license header 2025-11-05 17:39:21 +13:00
881e0e6798 chore: fix typo 2025-11-05 17:38:52 +13:00
2eab66e9ee refactor: added meta.site_id for matomo 2025-11-05 17:37:44 +13:00
3536a14e47 Merge remote-tracking branch 'origin/develop' into feature/frontend_update 2025-11-05 17:25:27 +13:00
98d62e1d1f [Feature] Make Matomo Site ID configurable via .env (#183)
Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#183
2025-11-05 10:19:07 +13:00
7eb4029ac9 refactor: add public_mode for static pages to remove nav elements 2025-11-04 19:34:04 +13:00
7b38fc2e37 fix: remove jobs clash 2025-11-04 19:33:31 +13:00
4834348454 Merge remote-tracking branch 'origin/develop' into feature/frontend_update 2025-10-30 14:02:57 +13:00
13ed86a780 [Feature] Identify Missing Rules (#177)
Fixes #97
Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#177
2025-10-30 00:47:45 +13:00
0a52b12f02 fix: handle line-clamp issue with news 2025-10-29 19:59:45 +13:00
5f390ac2d2 fix: reenable modal showing 2025-10-29 17:52:10 +13:00
46d21e60d2 chore: add example input to search 2025-10-29 16:36:01 +13:00
13be240226 feat: working search redirect 2025-10-29 16:30:00 +13:00
167a72f5a3 fix: remove obsolete menu list 2025-10-29 16:01:13 +13:00
1736319bd7 style: update navbar and add browse back 2025-10-29 15:58:17 +13:00
e87aae6bf7 style: add legal footers on login 2025-10-29 12:16:42 +13:00
253523c81f feat: add mock legal (impressum page) 2025-10-29 12:16:24 +13:00
15809a4ccf style: update login pages 2025-10-29 12:01:35 +13:00
b7e1dac66a feat: add mockup for static pages 2025-10-29 11:13:31 +13:00
a952c08469 [Feature] Basic logging of Jobs, Model Evaluation (#169)
Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#169
2025-10-27 22:34:05 +13:00
16a991220a Slim down Navbar 2025-10-22 12:10:46 +13:00
05c8e130b1 Add documentation link 2025-10-22 12:08:31 +13:00
4fd7856043 Remove fields from navbar 2025-10-22 12:07:55 +13:00
f5efaf1b3f Change to icon help button 2025-10-22 12:07:42 +13:00
4a2ef3a237 Add search icon mockup 2025-10-22 11:37:23 +13:00
63cc7cf460 Change partners location 2025-10-22 11:36:25 +13:00
819a94aced [Fix] Catch Exception for Adding Structures / Show PubChem Substances (#168)
Fixes #163
Fixes #165

Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#168
2025-10-22 01:13:06 +13:00
9ca94eeb42 Add initial design suggestion index page 2025-10-21 17:09:40 +13:00
de1dc75a12 Add styled footer 2025-10-20 22:30:11 +13:00
d98b60fc57 Add better image 2025-10-17 23:25:55 +13:00
86c3f9b808 Improve search look 2025-10-17 22:45:16 +13:00
4408a09e82 Add basic index redesign 2025-10-17 22:33:06 +13:00
f5889b270a New Layout for parallel styling
Signed-off-by: Tobias O <tobias.olenyi@envipath.com>
2025-10-17 20:25:50 +13:00
93dd811e39 [Fix] Pathway SVG Export (#157)
Fixes #103

Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#157
2025-10-16 02:25:30 +13:00
1f863fdcd6 [Fix] Remove Scenarios from Objects (#159)
Fixes #155

Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#159
2025-10-15 20:23:52 +13:00
386098b8a6 [Feature] EnzymeLink Annotations (#152)
Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#152
2025-10-15 19:35:26 +13:00
ef697ac5f5 [Fix] Added UZH Affiliation, Update UoA Images (#153)
Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#153
2025-10-15 19:25:23 +13:00
68a3f3b982 [Feature] Alias Support (#151)
Fixes #149

Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#151
2025-10-09 23:14:34 +13:00
7ad4112343 [Feature] External Identifier/References
Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#139
2025-10-02 00:40:00 +13:00
3f5bb76633 [Fix] Remove all Scenarios, catch empty SMILES, prevent default Package delete (#134)
Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#134
2025-09-30 19:10:57 +13:00
b757a07f91 [Misc] Performance improvements, SMIRKS Coverage, Minor Bugfixes (#132)
Bump Python Version to 3.12
Make use of "epauth" optional
Cache `srs` property of rules to speed up apply
Adjust view names for use of `reverse()`
Fix Views for Scenario Attachments
Added Simply Compare View/Template to identify differences between rdkit and ambit
Make migrations consistent with tests + compare
Fixes #76
Set default year for Scenario Modal
Fix html tags for package description
Added Tests for Pathway / Rule
Added remove stereo for apply

Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#132
2025-09-26 19:33:03 +12:00
b3079834c1 [Fix] Registering Issue (#125)
Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#125
2025-09-19 01:17:03 +12:00
50db2fb372 [Feature] MultiGen Eval (Backend) (#117)
Fixes #16

Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#117
2025-09-18 18:40:45 +12:00
762a6b7baf [Feature] Package Export/Import (#116)
Fixes #90
Fixes #91
Fixes #115
Fixes #104

Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#116
2025-09-16 02:41:10 +12:00
7905a8c2c1 [Bug] Fixes for Group handling, Load all objects only if necessary (#113)
Fixes #109
Fixes #110
Fixes #111
Fixes #112

Co-authored-by: Tim Lorsbach <tim@lorsba.ch>
Reviewed-on: enviPath/enviPy#113
2025-09-11 18:19:27 +12:00